Cardiotensor
Python Library Tractography Myocyte Orientation Cardiotensor ( ) is an open-source Python package developed to quantify 3D cardiomyocyte orientation and reconstruct continuous tractography of myoaggregates in volumetric cardiac imaging datasets. The library is designed for modern high-resolution modalities such as synchrotron tomography (HiP-CT), micro-CT, and 3D optical imaging. It supports datasets up to teravoxel scale through chunk-based and parallelized processing pipelines. Cardiotensor workflow: orientation computation with structure tensor, helical angle (HA) and intrusion angle (IA) mapping, and streamline-based tractography ...